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Single-cell profiling of the amphioxus digestive tract reveals conservation of endocrine cells in chordates 期刊论文
SCIENCE ADVANCES, 2024, 卷号: 10, 期号: 51
作者:  Dai, Yichen;  Pan, Rongrong;  Pan, Qi;  Wu, Xiaotong;  Cai, Zexin;  Fu, Yongheng;  Shi, Chenggang;  Sheng, Yuyu;  Li, Jingjing;  Lin, Zhe;  Liu, Gaoming;  Zhu, Pingfen;  Li, Meng;  Li, Guang;  Zhou, Xuming
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INSULIN-LIKE PEPTIDES  PARAHOX GENE-CLUSTER  BRANCHIOSTOMA-BELCHERI  BETA-CELL  TRANSCRIPTION FACTORS  EVOLUTIONARY ORIGINS  PANCREAS DEVELOPMENT  HOMEOBOX FACTOR  HATSCHEKS PIT  FACTOR-I  
π-HuB: the proteomic navigator of the human body 期刊论文
NATURE, 2024, 卷号: 636, 期号: 8042, 页码: 322-331
作者:  He, Fuchu;  Aebersold, Ruedi;  Baker, Mark S.;  Bian, Xiuwu;  Bo, Xiaochen;  Chan, Daniel W.;  Chang, Cheng;  Chen, Luonan;  Chen, Xiangmei;  Chen, Yu-Ju;  Cheng, Heping;  Collins, Ben C.;  Corrales, Fernando;  Cox, Juergen;  Weinan, E.;  Van Eyk, Jennifer E.;  Fan, Jia;  Faridi, Pouya;  Figeys, Daniel;  Gao, George Fu;  Gao, Wen;  Gao, Zu-Hua;  Goda, Keisuke;  Goh, Wilson Wen Bin;  Gu, Dongfeng;  Guo, Changjiang;  Guo, Tiannan;  He, Yuezhong;  Heck, Albert J. R.;  Hermjakob, Henning;  Hunter, Tony;  Iyer, Narayanan Gopalakrishna;  Jiang, Ying;  Jimenez, Connie R.;  Joshi, Lokesh;  Kelleher, Neil L.;  Li, Ming;  Li, Yang;  Lin, Qingsong;  Liu, Cui Hua;  Liu, Fan;  Liu, Guang-Hui;  Liu, Yansheng;  Liu, Zhihua;  Low, Teck Yew;  Lu, Ben;  Mann, Matthias;  Meng, Anming;  Moritz, Robert L.;  Nice, Edouard;  Ning, Guang;  Omenn, Gilbert S.;  Overall, Christopher M.;  Palmisano, Giuseppe;  Peng, Yaojin;  Pineau, Charles;  Poon, Terence Chuen Wai;  Purcell, Anthony W.;  Qiao, Jie;  Reddel, Roger R.;  Robinson, Phillip J.;  Roncada, Paola;  Sander, Chris;  Sha, Jiahao;  Song, Erwei;  Srivastava, Sanjeeva;  Sun, Aihua;  Sze, Siu Kwan;  Tang, Chao;  Tang, Liujun;  Tian, Ruijun;  Vizcaino, Juan Antonio;  Wang, Chanjuan;  Wang, Chen;  Wang, Xiaowen;  Wang, Xinxing;  Wang, Yan;  Weiss, Tobias;  Wilhelm, Mathias;  Winkler, Robert;  Wollscheid, Bernd;  Wong, Limsoon;  Xie, Linhai;  Xie, Wei;  Xu, Tao;  Xu, Tianhao;  Yan, Liying;  Yang, Jing;  Yang, Xiao;  Yates, John;  Yun, Tao;  Zhai, Qiwei;  Zhang, Bing;  Zhang, Hui;  Zhang, Lihua;  Zhang, Lingqiang;  Zhang, Pingwen;  Zhang, Yukui;  Zheng, Yu Zi;  Zhong, Qing;  Zhu, Yunping;  Tan, Chris Soon Heng;  Gao, Mingxia;  Gao, Qiang;  Gao, Yushun;  Guo, Xuejiang;  He, Jie;  He, Jun;  He, Qing-Yu;  Hou, Jinlin;  Huang, Canhua;  Jia, Chenxi;  Kuster, Bernhard;  Li, Chaoying;  Li, Dong;  Li, Yanchang;  Liu, Siqi;  Liu, Xiaonan;  Liu, Ya;  Liu, Zhongyang;  Lu, Haojie;  Nie, Yongzhan;  Okada, Mariko;  Qian, Guojun;  Qin, Hongqiang;  Rao, Yu;  Rao, Zihe;  Ren, Xianwen;  Ren, Yan;  Shen, Feng;  Shen, Lin;  Su, Shicheng;  Tan, Minjia;  Tang, Ben Zhong;  Tao, Sheng-Ce;  Wang, Jian;  Wang, Tong;  Wei, Liming;  Wong, Catherine C. L.;  Xie, Xiaoliang Sunney;  Xu, Li;  Xu, Ping;  Yang, Huanming;  Yang, Jianjun;  Ye, Mingliang;  Ying, Wantao;  Yu, Xiaobo;  Yuan, Yaxiang;  Zeng, Qingcun;  Zhan, Qimin;  Zhang, Xiaofei;  Zhang, Xu;  Zhang, Ying;  Zhong, Nan-Shan;  Zhou, Feng;  Zhu, Yi;  Zhang, Zemin
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CHINA PUSHES  DISEASE  ATLAS  DRAFT  
Spatial transcriptomic landscape unveils immunoglobin-associated senescence as a hallmark of aging 期刊论文
CELL, 2024, 卷号: 187, 期号: 24
作者:  Ma, Shuai;  Ji, Zhejun;  Zhang, Bin;  Geng, Lingling;  Cai, Yusheng;  Nie, Chao;  Li, Jiaming;  Zuo, Yuesheng;  Sun, Yuzhe;  Xu, Gang;  Liu, Beibei;  Ai, Jiaqi;  Liu, Feifei;  Zhao, Liyun;  Zhang, Jiachen;  Zhang, Hui;  Sun, Shuhui;  Huang, Haoyan;  Zhang, Yiyuan;  Ye, Yanxia;  Fan, Yanling;  Zheng, Fangshuo;  Hu, Jinghao;  Zhang, Baohu;  Li, Jingyi;  Feng, Xin;  Zhang, Feng;  Zhuang, Yuan;  Li, Tianjie;  Yu, Yang;  Bao, Zhaoshi;  Pan, Sipei;  Esteban, Concepcion Rodriguez;  Liu, Zhili;  Deng, Haohao;  Wen, Feng;  Song, Moshi;  Wang, Si;  Zhu, Guodong;  Yang, Jiayin;  Jiang, Tao;  Song, Weihong;  Belmonte, Juan Carlos Izpisua;  Qu, Jing;  Zhang, Weiqi;  Gu, Ying;  Li, Guang-Hui
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CELLULAR SENESCENCE  SECRETORY PHENOTYPE  CELLS  REPROGRAMS  ATLAS  HISAT  
Immunosenescence Inventory-a multi-omics database for immune aging research 期刊论文
NUCLEIC ACIDS RESEARCH, 2024, 卷号: 53, 期号: D1, 页码: D1047-D1054
作者:  Li, Hao;  Zhao, Wei;  Yang, Fei;  Qiao, Qin;  Ma, Shuai;  Yang, Kuan;  Song, Shuhui;  Wang, Si;  Qu, Jing;  Liu, Guang-Hui;  Bao, Yiming;  Zhang, Weiqi
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SYSTEM  
Metformin decelerates aging clock in male monkeys 期刊论文
CELL, 2024, 卷号: 187, 期号: 22
作者:  Yang, Yuanhan;  Lu, Xiaoyong;  Liu, Ning;  Ma, Shuai;  Zhang, Hui;  Zhang, Zhiyi;  Yang, Kuan;  Jiang, Mengmeng;  Zheng, Zikai;  Qiao, Yicheng;  Hu, Qinchao;  Huang, Ying;  Zhang, Yiyuan;  Xiong, Muzhao;  Liu, Lixiao;  Jiang, Xiaoyu;  Reddy, Pradeep;  Dong, Xueda;  Xu, Fanshu;  Wang, Qiaoran;  Zhao, Qian;  Lei, Jinghui;  Sun, Shuhui;  Jing, Ying;  Li, Jingyi;  Cai, Yusheng;  Fan, Yanling;  Yan, Kaowen;  Jing, Yaobin;  Haghani, Amin;  Xing, Mengen;  Zhang, Xuan;  Zhu, Guodong;  Song, Weihong;  Horvath, Steve;  Esteban, Concepcion Rodriguez;  Song, Moshi;  Wang, Si;  Zhao, Guoguang;  Li, Wei;  Belmonte, Juan Carlos Izpisua;  Qu, Jing;  Zhang, Weiqi;  Liu, Guang-Hui
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HUMAN PLASMA PROTEOME  SOFTWARE  PATHWAY  MORTALITY  PACKAGE  MODELS  IMAGE  
CRISPR screening uncovers nucleolar RPL22 as a heterochromatin destabilizer and senescence driver 期刊论文
NUCLEIC ACIDS RESEARCH, 2024, 页码: 352-352
作者:  Li, Hong-Yu;  Wang, Min;  Jiang, Xiaoyu;  Jing, Yaobin;  Wu, Zeming;  He, Yifang;  Yan, Kaowen;  Sun, Shuhui;  Ma, Shuai;  Ji, Zhejun;  Wang, Si;  Belmonte, Juan Carlos Izpisua;  Qu, Jing;  Zhang, Weiqi;  Wei, Taotao;  Liu, Guang-Hui
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LIFE-SPAN EXTENSION  RIBOSOME BIOGENESIS  STEM-CELLS  RNA  CANCER  TRANSCRIPTION  HOMEOSTASIS  ACTIVATION  KNOCKOUT  SUBUNITS  
CRISPR-based screening pinpoints H2AZ1 as a driver of senescence in human mesenchymal stem cells 期刊论文
PROTEIN & CELL, 2024, 页码: 460-474
作者:  Li, Ming-Heng;  Jiang, Xiaoyu;  Jing, Yaobin;  Yan, Kaowen;  Bi, Shi-Jia;  Wang, Si;  Ma, Shuai;  Liu, Guang-Hui;  Zhang, Weiqi;  Sun, Shuhui;  Qu, Jing
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Single-nucleus transcriptomics uncovers a geroprotective role of YAP in primate gingival aging 期刊论文
PROTEIN & CELL, 2024, 卷号: 15, 期号: 8, 页码: 612-632
作者:  Hu, Qinchao;  Zhang, Bin;  Jing, Yaobin;  Ma, Shuai;  Hu, Lei;  Li, Jingyi;  Zheng, Yandong;  Xin, Zijuan;  Peng, Jianmin;  Wang, Si;  Cheng, Bin;  Qu, Jing;  Zhang, Weiqi;  Liu, Guang-Hui;  Wang, Songlin
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ENDOGENOUS RETROVIRUSES  RNA-SEQ  CELL  PERIODONTITIS  LANDSCAPE  PATHWAYS  BIOLOGY  DAMAGE  TAZ  
The sirtuin-associated human senescence program converges on the activation of PAPPA 期刊论文
DEVELOPMENTAL CELL, 2024, 卷号: 59, 期号: 8, 页码: 364-384
作者:  Bi, Shijia;  Jiang, Xiaoyu;  Ji, Qianzhao;  Wang, Zehua;  Ren, Jie;  Wang, Si;  Yu, Yang;  Wang, Ruoqi;  Liu, Zunpeng;  Liu, Junhang;  Hu, Jianli;  Sun, Guoqiang;  Wu, Zeming;  Diao, Zhiqing;  Li, Jingyi;  Sun, Liang;  Belmonte, Juan Carlos Izpisua;  Zhang, Weiqi;  Liu, Guang-Hui;  Qu, Jing
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PLASMA-PROTEIN-A  TRANSCRIPTIONAL ACTIVATION  READ ALIGNMENT  DOMAINS  ORGANIZATION  EXPRESSION  REGULATOR  STRESS  CTCF  HETEROCHROMATIN  
DNA methylation clocks for estimating biological age in Chinese cohorts 期刊论文
PROTEIN & CELL, 2024
作者:  Zheng, Zikai;  Li, Jiaming;  Liu, Tianzi;  Fan, Yanling;  Zhai, Qiao-Cheng;  Xiong, Muzhao;  Wang, Qiao-Ran;  Sun, Xiaoyan;  Zheng, Qi-Wen;  Che, Shanshan;  Jiang, Beier;  Zheng, Quan;  Wang, Cui;  Liu, Lixiao;  Ping, Jiale;  Wang, Si;  Gao, Dan-Dan;  Ye, Jinlin;  Yang, Kuan;  Zuo, Yuesheng;  Ma, Shuai;  Yang, Yun-Gui;  Qu, Jing;  Zhang, Feng;  Jia, Peilin;  Liu, Guang-Hui;  Zhang, Weiqi
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CHRONOLOGICAL AGE  HEART-DISEASE  BLOOD-CELLS  PROTEIN  EXPRESSION  RISK  CYTOMEGALOVIRUS  IDENTIFICATION  TRANSCRIPTION  DISPARITIES